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dctB [2018-06-05 17:27:11]
C4-dicarboxylate binding protein, co-sensor for DctS
function
sensing of C4-dicarboxylates
product
C4-dicarboxylate binding protein
Genomic Context
categories
[category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.1|Utilization of organic acids]Gene
Coordinates
496,646 → 497,698
The protein
Catalyzed reaction/ biological activity
not involved in C4-dicarboxylate transport [Pubmed|24375102]acts as co-sensor for [protein|9A96572B101358768EB20EE9438BE0E1424A4130|DctS] [Pubmed|24375102]Protein family
bacterial solute-binding protein 7 family (according to Swiss-Prot)Structure
[PDB|4O94] (from Rhodopseudomonas palustris, 41% identity)[SW|Localization]
secreted (according to Swiss-Prot)Expression and Regulation
Operons
genes
[gene|7428E80AC67A659B8602AF887EA7DFFD4976B40C|dctB]-[gene|01CE4BBBEB0C0855201D396FB8036F72B64EA7DD|ydbD]
description
[Pubmed|10708364]
sigma factors
[protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|15805528], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]regulation
induced by stress ([protein|search|SigB]) [Pubmed|15805528]view in new tabBiological materials
Mutant
BKE04440 (Δ[gene|7428E80AC67A659B8602AF887EA7DFFD4976B40C|dctB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE04440 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGAAAAGCCCTCCCCTAT, downstream forward: _UP4_TAGTTCCCATCTCGATACGCBKK04440 (Δ[gene|7428E80AC67A659B8602AF887EA7DFFD4976B40C|dctB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK04440 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGAAAAGCCCTCCCCTAT, downstream forward: _UP4_TAGTTCCCATCTCGATACGCReferences
